Cancersea数据库官网

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August undefined, 2024

WebJan 8, 2024 · CancerSEA also provides functional state-associated PCG/lncRNA repertoires across all cancers, in specific cancers, and in individual cancer single-cell … http://gepia.cancer-pku.cn/

UCP1 modulates immune infiltration level and survival outcome in ...

http://biocc.hrbmu.edu.cn/CancerSEA/home.jsp WebGene Expression Omnibus. GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are accepted. Tools are provided to help users query and download experiments and curated gene expression profiles. dickey ridge trail shenandoah

超详细的cancerSEA数据库的使用教程_癌症 - 搜狐

WebNov 10, 2024 · CancerSEA database analysis revealed that UBE2T was positively associated with the cell cycle in various cancers(r > 0.60, p < 0.001). The risk signature of UrCCGs can reliably predict the prognosis of LUAD (AUC1 year = 0.720, AUC3 year = 0.700, AUC5 year = 0.630). The CC method classified the TCGA-LUAD cohort into 4 … WebJun 18, 2024 · CancerSEA数据库中的单细胞测序结果来源于SRA，GEO和 ArrayExpress网站中的72个数据集，总共收录了25种癌症的41900个肿瘤细胞；功能分析结果来源于HCMDB，Cyclebase和StemMapper等数据集，总共重新定义了14种功能状态。 WebOct 17, 2024 · CancerSEA portrays a cancer single-cell functional state atlas, involving 14 functional states (including stemness, invasion, metastasis, proliferation, EMT, … citizens bank western avenue albany ny

GEPIA (Gene Expression Profiling Interactive Analysis)

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WebMar 2, 2024 · 从这个列表来看，这个 CancerSEA ，确实只能说是一个上古时代的癌症单细胞数据库资源，因为里面的数据集都是2024或者之前的，那个时候10x技术还不发达， … Weblist) of interest in different cancers. CancerSEA also provides functional state-associated PCG/lncRNA repertoires across all cancers, in speciﬁc cancers, and in individual cancer single-cell datasets. In sum-mary, CancerSEA provides a user-friendly interface for comprehensively searching, browsing, visualiz- dickey ridge visitor centerWebThe Genotype-Tissue Expression (GTEx) project is an ongoing effort to build a comprehensive public resource to study tissue-specific gene expression and regulation. Samples were collected from 53 non-diseased tissue sites across nearly 1000 individuals, primarily for molecular assays including WGS, WES and RNA-seq. Remaining samples … citizens bank west bloomfield michigan

"http://biocc.hrbmu.edu.cn/CancerSEA/home.jsp " - Cancersea数据库官网

Cancersea数据库官网

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WebJan 3, 2024 · CancerSEA portrays a cancer single-cell functional state atlas, involving 14 functional states (including stemness, invasion, metastasis, proliferation, EMT, … WebSep 29, 2024 · The CancerSEA database reveals the functional status of different cancer cells at the single cell level, involving 14 functional states of 41,900 cancer single cells from 25 cancer types (Yuan et al. 2024). In this study, FDX1 expression was positively correlated with tumor cell quiescence and inflammation, and negatively correlated with tumor ...

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WebGEPIA (Gene Expression Profiling Interactive Analysis) Single Gene Analysis. Cancer Type Analysis. WebJan 28, 2024 · CancerSEA analysis indicated possible functions of UCPs in OV cells and the results hinted that UCP1 mainly participates in tumor progression by regulating the malignant behavior of ovarian cancer cells, including invasion, EMT, metastasis. At the same time, UCP3 may mediate invasion and UCP5 may participate in angiogenesis in …

WebJan 7, 2024 · With the proliferating studies of human cancers by single-cell RNA sequencing technique (scRNA-seq), cellular heterogeneity, immune landscape and pathogenesis within diverse cancers have been uncovered successively. The exponential explosion of massive cancer scRNA-seq datasets in the past decade ar … WebFunctions of CancerSEA. Providing a cancer single-cell functional state atlas, involving 14 functional states of 41,900 cancer single cells from 25 cancer types. Querying which functional states the gene (including PCG …

WebMar 20, 2024 · CancerSEA是一个癌症单细胞状态图谱，允许用户查询基因(包括PCGs和lncrna)与14种功能状态之间的关系。Easy-to-use接口提供搜索、浏览、可视化和下载数据功能。 CancerSEA能做什么？通过基因查询其功能状态. 拿到一堆基因，但是我不知道它们有 … WebThe Therapeutically Applicable Research to Generate Effective Treatments (TARGET) program applies a comprehensive genomic approach to determine molecular changes that drive childhood cancers. The goal of the program is to use data to guide the development of more effective, less toxic therapies for children. TARGET is organized into a ...

WebFunctions of CancerSEA. Providing a cancer single-cell functional state atlas, involving 14 functional states of 41,900 cancer single cells from 25 cancer types. Querying which … Activity of Metastasis and associated gene repertories across all cancer types Signature Description No. genes Source Download; Angiogenesis: Angiogenesis … Overview of CancerSEA. In this page, users can browse the functional states atlas of … Number of single-cells in each cancer before and after QC. Proportion of cell … CancerSEA is the first dedicated database that aims to comprehensively resolve …

WebCancer Single-cell Expression Map. A public database dedicating to collecting, analyzing, visualizing single-cell RNA-Seq data of human cancers. Multi-level analyses were performed to deeply explore the tumor microenvironment of different types of human cancers and a comprehensive online analyze platform was equipped in the database. Project ... dickey river steelheadWebOct 17, 2024 · CancerSEA portrays a cancer single-cell functional state atlas, involving 14 functional states (including stemness, invasion, metastasis, proliferation, EMT, angiogenesis, apoptosis, cell cycle ... citizens bank western aveWebNov 23, 2024 · 该数据库包含25种人类癌症中的41 900个癌症单细胞，其中包括14种癌症相关功能状态。. 通过描述每个癌细胞的这些功能状态活动，CancerSEA提供了一个癌症单细胞功能状态图谱，并将蛋白质编码基因（PCG）和lncRNAs与这些单细胞水平的功能状态相关联，以促进对癌 ... citizens bank westerly riWebAug 28, 2024 · 一、内容丰富的cancerSEA数据库. 一进入数据库，映入眼帘的就是一丛花朵，花丛以血管作为枝干，间或分布有灰色的细胞。. 这14朵花对应的就是数据库提供了14种癌症相关功能状态（血管生成、细胞凋亡、细胞周期、细胞分化、DNA损伤、DNA修复、EMT、细胞缺氧 ... citizens bank westford maWebDec 2, 2024 · 近日，中国科学院北京基因组研究所（国家生物信息中心）国家基因组科学数据中心开发的癌症单细胞表达图谱数据库CancerSCEM上线。该研究成果以CancerSCEM: a database of single-cell expression map across various human cancers为题在国际学术期刊Nucleic Acid Research在线发表。单细胞分辨率的全转录组测序技术（scRNA-seq ... dickey riverWebFeb 23, 2024 · CancerSEA enables exploration of gene set enrichment scores for gene sets pertaining to cancer-related processes, but does not enable visualization, differential expression, or cell type identification. In short, while web-based tools exist for exploring expression data, most do not allow for detailed analysis of scRNA-seq data across … dickey river wahttp://biocc.hrbmu.edu.cn/CancerSEA/home.jsp citizens bank western ave albany